Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf8Q8VC56 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm44086-201ENSMUST00000203251 2349 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm36970-201ENSMUST00000193688 1859 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm14660-201ENSMUST00000119809 575 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm44124-201ENSMUST00000204159 472 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm40466-201ENSMUST00000212174 422 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Gm12846-201ENSMUST00000120431 1373 ntBASIC12□□□□□ -0.49
Rnf8Q8VC56 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12□□□□□ -0.49
Rnf8Q8VC56 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf8Q8VC56 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm16479-201ENSMUST00000121706 932 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms