Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup35Q8R4R6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm11637-201ENSMUST00000120601 592 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm16479-201ENSMUST00000121706 932 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Rmrp-201ENSMUST00000157463 271 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm37042-201ENSMUST00000193816 581 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm6218-201ENSMUST00000219812 628 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup35Q8R4R6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Snord83b-201ENSMUST00000104546 94 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm12928-201ENSMUST00000117115 573 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm26185-201ENSMUST00000157692 266 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms