Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm12314-201ENSMUST00000118104 538 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm9083-201ENSMUST00000120423 819 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm27023-201ENSMUST00000182372 285 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.2□□□□□ -0.46
Treml1Q8K558 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Treml1Q8K558 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Treml1Q8K558 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Treml1Q8K558 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm26956-201ENSMUST00000182176 986 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm7783-201ENSMUST00000204795 781 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Treml1Q8K558 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Treml1Q8K558 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.19□□□□□ -0.46
Treml1Q8K558 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Treml1Q8K558 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.18□□□□□ -0.46
Treml1Q8K558 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.18□□□□□ -0.46
Treml1Q8K558 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Treml1Q8K558 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms