Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Gm42937-201ENSMUST00000197360 752 ntBASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Gm4780-202ENSMUST00000215200 2644 ntBASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm9083-201ENSMUST00000120423 819 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm14726-201ENSMUST00000120623 896 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm44364-201ENSMUST00000198368 141 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3a1Q8K4Z5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Gm28882-201ENSMUST00000185504 314 ntBASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sf3a1Q8K4Z5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sf3a1Q8K4Z5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.15■□□□□ 0.02
Sf3a1Q8K4Z5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sf3a1Q8K4Z5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms