Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm27023-201ENSMUST00000182372 285 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm27243-201ENSMUST00000183964 521 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm37201-201ENSMUST00000191845 523 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm6013-201ENSMUST00000212264 699 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm43118-201ENSMUST00000199149 775 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm10076-201ENSMUST00000073238 384 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.69□□□□□ -0.54
Clrn1Q8K445 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Clrn1Q8K445 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm12058-201ENSMUST00000118614 437 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm4986-201ENSMUST00000119731 549 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm13875-201ENSMUST00000120162 282 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Clrn1Q8K445 Gm13342-201ENSMUST00000121055 207 ntBASIC11.68□□□□□ -0.54
Clrn1Q8K445 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms