Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtn1Q8K0T0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Rtn1Q8K0T0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtn1Q8K0T0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rtn1Q8K0T0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rtn1Q8K0T0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rtn1Q8K0T0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Mir1938-201ENSMUST00000158746 100 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtn1Q8K0T0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Gm24845-201ENSMUST00000158034 109 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Gm26956-201ENSMUST00000182176 986 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Gm30285-201ENSMUST00000214614 422 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms