Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.03□□□□□ -0.48
SynpoQ8CC35 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.03□□□□□ -0.48
SynpoQ8CC35 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.02□□□□□ -0.48
SynpoQ8CC35 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SynpoQ8CC35 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SynpoQ8CC35 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm8738-201ENSMUST00000172606 329 ntBASIC12.02□□□□□ -0.49
SynpoQ8CC35 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.02□□□□□ -0.49
SynpoQ8CC35 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm4857-201ENSMUST00000192718 785 ntBASIC12.02□□□□□ -0.49
SynpoQ8CC35 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SynpoQ8CC35 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.02□□□□□ -0.49
SynpoQ8CC35 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.01□□□□□ -0.49
SynpoQ8CC35 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.01□□□□□ -0.49
SynpoQ8CC35 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Mir877-201ENSMUST00000104738 85 ntBASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm12502-201ENSMUST00000120197 444 ntBASIC12.01□□□□□ -0.49
SynpoQ8CC35 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.01□□□□□ -0.49
SynpoQ8CC35 Gm20482-202ENSMUST00000174729 825 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms