Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Uba3Q8C878 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Cog3-203ENSMUST00000227473 4197 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Gm23119-201ENSMUST00000158610 140 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Uba3Q8C878 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Mir6420-201ENSMUST00000185032 102 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Gm7783-201ENSMUST00000204795 781 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 Gm21769-201ENSMUST00000211922 111 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.04□□□□□ -0.32
Uba3Q8C878 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.04□□□□□ -0.32
Uba3Q8C878 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.04□□□□□ -0.32
Uba3Q8C878 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba3Q8C878 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm24255-201ENSMUST00000104481 128 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm14726-201ENSMUST00000120623 896 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm7584-201ENSMUST00000175829 940 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm31256-201ENSMUST00000194705 506 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba3Q8C878 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm44958-201ENSMUST00000203734 736 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm8712-201ENSMUST00000221090 701 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.03□□□□□ -0.32
Uba3Q8C878 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Uba3Q8C878 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba3Q8C878 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Uba3Q8C878 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba3Q8C878 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Uba3Q8C878 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Gm14832-201ENSMUST00000121289 322 ntBASIC13.02□□□□□ -0.33
Uba3Q8C878 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.02□□□□□ -0.33
Uba3Q8C878 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms