Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ppp4r4Q8C0Y0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm37489-201ENSMUST00000191883 159 ntBASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ppp4r4Q8C0Y0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Gm42627-201ENSMUST00000197347 224 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ppp4r4Q8C0Y0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms