Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm14644-201ENSMUST00000116671 647 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm45224-201ENSMUST00000208203 414 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm45696-201ENSMUST00000212088 985 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.76□□□□□ -0.21
Trim47Q8C0E3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim47Q8C0E3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim47Q8C0E3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm2383-201ENSMUST00000181461 807 ntBASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.74□□□□□ -0.21
Trim47Q8C0E3 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.74□□□□□ -0.21
Trim47Q8C0E3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.74□□□□□ -0.21
Trim47Q8C0E3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.74□□□□□ -0.21
Trim47Q8C0E3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms