Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trub1Q8C0D0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trub1Q8C0D0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Gm4034-201ENSMUST00000187674 480 ntBASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.77□□□□□ -0.37
Trub1Q8C0D0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.77□□□□□ -0.37
Trub1Q8C0D0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm13786-201ENSMUST00000122371 333 ntBASIC12.76□□□□□ -0.37
Trub1Q8C0D0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm25043-201ENSMUST00000158604 212 ntBASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm42599-201ENSMUST00000201308 469 ntBASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trub1Q8C0D0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm12742-201ENSMUST00000117326 410 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms