Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Snord83b-201ENSMUST00000104546 94 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm16177-201ENSMUST00000120728 718 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tnfsfm13Q8BXS2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Cog3-203ENSMUST00000227473 4197 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm12390-201ENSMUST00000117897 397 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm1335-201ENSMUST00000121653 386 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm29127-201ENSMUST00000188304 517 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm40466-201ENSMUST00000212174 422 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tnfsfm13Q8BXS2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Tnfsfm13Q8BXS2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms