Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm11989-201ENSMUST00000117240 672 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm11362-201ENSMUST00000118838 850 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 AU022133-201ENSMUST00000200601 873 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm7848-201ENSMUST00000210739 718 ntBASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rd3Q8BRE0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rd3Q8BRE0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rd3Q8BRE0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rd3Q8BRE0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm24231-201ENSMUST00000104315 133 ntBASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm9062-201ENSMUST00000117712 727 ntBASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm18734-201ENSMUST00000172937 808 ntBASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rd3Q8BRE0 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12616-201ENSMUST00000118594 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12624-201ENSMUST00000177615 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12621-201ENSMUST00000177760 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12615-201ENSMUST00000177970 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12622-201ENSMUST00000177975 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12627-201ENSMUST00000178412 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12625-201ENSMUST00000179122 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12614-201ENSMUST00000179586 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm12613-201ENSMUST00000180323 382 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms