Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.21□□□□□ -0.77
Smco3Q8BQM7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco3Q8BQM7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm5279-201ENSMUST00000199575 745 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm7775-201ENSMUST00000218871 853 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Smco3Q8BQM7 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms