Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.9□□□□□ -0.5
SynbQ8BI41 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SynbQ8BI41 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SynbQ8BI41 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.9□□□□□ -0.5
SynbQ8BI41 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SynbQ8BI41 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
SynbQ8BI41 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
SynbQ8BI41 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SynbQ8BI41 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SynbQ8BI41 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.89□□□□□ -0.51
SynbQ8BI41 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 AA914427-201ENSMUST00000193194 1166 ntBASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm5950-201ENSMUST00000213337 772 ntBASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SynbQ8BI41 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SynbQ8BI41 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SynbQ8BI41 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.88□□□□□ -0.51
SynbQ8BI41 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SynbQ8BI41 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SynbQ8BI41 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Gm25214-201ENSMUST00000104573 129 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.88□□□□□ -0.51
SynbQ8BI41 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Mir5120-201ENSMUST00000175020 78 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SynbQ8BI41 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 Mir6979-201ENSMUST00000183927 56 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.88□□□□□ -0.51
SynbQ8BI41 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.88□□□□□ -0.51
SynbQ8BI41 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms