Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.29□□□□□ -0.44
Ubp1Q811S7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm13736-201ENSMUST00000119272 253 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm13315-201ENSMUST00000120376 991 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm7046-201ENSMUST00000221351 977 ntBASIC12.28□□□□□ -0.44
Ubp1Q811S7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubp1Q811S7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ubp1Q811S7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm12241-201ENSMUST00000118330 726 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm2546-201ENSMUST00000182630 991 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm37293-201ENSMUST00000191658 295 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm9368-201ENSMUST00000219348 831 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Morn2-202ENSMUST00000227729 656 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ubp1Q811S7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.27□□□□□ -0.45
Ubp1Q811S7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms