Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.38□□□□□ -0.43
Rpp38Q80UU2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpp38Q80UU2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm14726-201ENSMUST00000120623 896 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm21769-201ENSMUST00000211922 111 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm30285-201ENSMUST00000214614 422 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpp38Q80UU2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Gm27516-201ENSMUST00000184237 98 ntBASIC12.36□□□□□ -0.43
Rpp38Q80UU2 Mir8109-201ENSMUST00000184375 117 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms