Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Prpf38bQ80SY5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm11531-201ENSMUST00000117614 555 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm3096-201ENSMUST00000185770 364 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm29155-201ENSMUST00000185910 269 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm9540-201ENSMUST00000188230 478 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm44262-201ENSMUST00000204969 372 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Gm8285-201ENSMUST00000208293 759 ntBASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf38bQ80SY5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Prpf38bQ80SY5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf38bQ80SY5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms