Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm10434-201ENSMUST00000101158 471 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm9630-201ENSMUST00000178304 885 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm9823-201ENSMUST00000051212 327 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3d21Q7TSG5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3d21Q7TSG5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3d21Q7TSG5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.58□□□□□ -0.23
Sh3d21Q7TSG5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3d21Q7TSG5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Gm14760-201ENSMUST00000121831 999 ntBASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3d21Q7TSG5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Gm27023-201ENSMUST00000182372 285 ntBASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Gm9022-201ENSMUST00000182482 992 ntBASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3d21Q7TSG5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms