Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm19994-201ENSMUST00000217086 586 ntBASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubfd1Q78JW9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm4909-201ENSMUST00000118749 794 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm18827-201ENSMUST00000188341 790 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm17812-201ENSMUST00000204935 318 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubfd1Q78JW9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms