Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
Timd4Q6U7R4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm14999-201ENSMUST00000121039 624 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm27023-201ENSMUST00000182372 285 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm28196-201ENSMUST00000187719 640 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm38341-201ENSMUST00000195357 515 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm30285-201ENSMUST00000214614 422 ntBASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Timd4Q6U7R4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Paupar-201ENSMUST00000194826 3482 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm7584-201ENSMUST00000175829 940 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm44958-201ENSMUST00000203734 736 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm21769-201ENSMUST00000211922 111 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Gm10076-201ENSMUST00000073238 384 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Timd4Q6U7R4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.53□□□□□ -0.56
Timd4Q6U7R4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms