Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm13369-201ENSMUST00000119442 987 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm27243-201ENSMUST00000183964 521 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Gm24526-201ENSMUST00000082921 158 ntBASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scaf4Q6PFF0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scaf4Q6PFF0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm11803-201ENSMUST00000119966 444 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm11964-201ENSMUST00000120982 444 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm8810-201ENSMUST00000172895 754 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm4034-201ENSMUST00000187674 480 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm7287-201ENSMUST00000205267 602 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Gm45668-201ENSMUST00000211271 493 ntBASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scaf4Q6PFF0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms