Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rad54bQ6PFE3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm29649-201ENSMUST00000185649 419 ntBASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm5035-201ENSMUST00000215581 927 ntBASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rad54bQ6PFE3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.46□□□□□ -0.41
Rad54bQ6PFE3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms