Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Nup98Q6PFD9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm14193-201ENSMUST00000105067 153 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm15610-201ENSMUST00000120584 195 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm10752-201ENSMUST00000218348 729 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm14460-201ENSMUST00000121511 639 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm8194-201ENSMUST00000159783 859 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm9463-201ENSMUST00000206707 601 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Snora73b-201ENSMUST00000083419 205 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup98Q6PFD9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm6450-201ENSMUST00000200896 574 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm2517-201ENSMUST00000215651 348 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nup98Q6PFD9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms