Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Snrnp40Q6PE01 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Snrnp40Q6PE01 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Snrnp40Q6PE01 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Snrnp40Q6PE01 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Snrnp40Q6PE01 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm11509-201ENSMUST00000117358 325 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm11675-201ENSMUST00000121873 832 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm7666-201ENSMUST00000146631 819 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm28324-201ENSMUST00000187913 264 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Snrnp40Q6PE01 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm4726-201ENSMUST00000135604 736 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm6019-201ENSMUST00000148369 736 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms