Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vsx2Q61412 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Mir1247-201ENSMUST00000116706 82 ntBASIC12.1□□□□□ -0.47
Vsx2Q61412 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm13813-201ENSMUST00000120998 787 ntBASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vsx2Q61412 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gm45930-201ENSMUST00000221330 292 ntBASIC12.1□□□□□ -0.47
Vsx2Q61412 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vsx2Q61412 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.1□□□□□ -0.47
Vsx2Q61412 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vsx2Q61412 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vsx2Q61412 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm13492-201ENSMUST00000119772 665 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Mospd4-201ENSMUST00000180618 576 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm37489-201ENSMUST00000191883 159 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm38092-201ENSMUST00000195600 653 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm43179-201ENSMUST00000198797 275 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm24526-201ENSMUST00000082921 158 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.09□□□□□ -0.47
Vsx2Q61412 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vsx2Q61412 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vsx2Q61412 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Vsx2Q61412 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.08□□□□□ -0.47
Vsx2Q61412 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vsx2Q61412 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vsx2Q61412 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms