Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a1Q61245 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a1Q61245 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a1Q61245 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col11a1Q61245 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm13117-201ENSMUST00000120894 691 ntBASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.58□□□□□ -0.24
Col11a1Q61245 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col11a1Q61245 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.58□□□□□ -0.24
Col11a1Q61245 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col11a1Q61245 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm25053-201ENSMUST00000103982 133 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm25922-201ENSMUST00000104281 130 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm24679-201ENSMUST00000158762 111 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm28937-201ENSMUST00000185413 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm29400-201ENSMUST00000187208 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm28662-201ENSMUST00000188446 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm28251-201ENSMUST00000188835 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm37318-201ENSMUST00000194325 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm38017-201ENSMUST00000194768 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm37287-201ENSMUST00000195449 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm37793-201ENSMUST00000195548 695 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm5870-201ENSMUST00000196461 282 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm25053-202ENSMUST00000199731 132 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm9089-201ENSMUST00000122027 526 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.57□□□□□ -0.24
Col11a1Q61245 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm22146-201ENSMUST00000157397 288 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm9192-201ENSMUST00000183221 985 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm4978-201ENSMUST00000071565 801 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.57□□□□□ -0.24
Col11a1Q61245 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col11a1Q61245 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Col11a1Q61245 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.56□□□□□ -0.24
Col11a1Q61245 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm5700-201ENSMUST00000191483 989 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Gm39288-201ENSMUST00000210554 446 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.56□□□□□ -0.24
Col11a1Q61245 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.56□□□□□ -0.24
Col11a1Q61245 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Col11a1Q61245 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col11a1Q61245 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms