Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm44958-201ENSMUST00000203734 736 ntBASIC14.46□□□□□ -0.09
Prdm1Q60636 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.46□□□□□ -0.09
Prdm1Q60636 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prdm1Q60636 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prdm1Q60636 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prdm1Q60636 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.46□□□□□ -0.1
Prdm1Q60636 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.46□□□□□ -0.1
Prdm1Q60636 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.45□□□□□ -0.1
Prdm1Q60636 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.45□□□□□ -0.1
Prdm1Q60636 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.45□□□□□ -0.1
Prdm1Q60636 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prdm1Q60636 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.45□□□□□ -0.1
Prdm1Q60636 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prdm1Q60636 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Gm20482-202ENSMUST00000174729 825 ntBASIC14.44□□□□□ -0.1
Prdm1Q60636 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.44□□□□□ -0.1
Prdm1Q60636 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prdm1Q60636 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.44□□□□□ -0.1
Prdm1Q60636 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prdm1Q60636 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Prdm1Q60636 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms