Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vps54Q5SPW0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Gm44262-201ENSMUST00000204969 372 ntBASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps54Q5SPW0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps54Q5SPW0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vps54Q5SPW0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.83□□□□□ -0.03
Vps54Q5SPW0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vps54Q5SPW0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm13665-201ENSMUST00000120830 528 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.83□□□□□ -0.04
Vps54Q5SPW0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms