Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps13aQ5H8C4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps13aQ5H8C4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps13aQ5H8C4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps13aQ5H8C4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Gm14234-201ENSMUST00000119539 845 ntBASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Gm5705-201ENSMUST00000066241 711 ntBASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Gm13117-201ENSMUST00000120894 691 ntBASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps13aQ5H8C4 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm14892-201ENSMUST00000117636 267 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm5714-201ENSMUST00000197343 566 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm15004-201ENSMUST00000119192 630 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm5419-201ENSMUST00000119301 527 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm11783-201ENSMUST00000119549 885 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Mir744-201ENSMUST00000103261 100 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm11957-201ENSMUST00000118304 779 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm14270-201ENSMUST00000118388 846 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm12337-201ENSMUST00000119634 400 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm11244-201ENSMUST00000121243 237 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Gm9204-201ENSMUST00000212641 947 ntBASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps13aQ5H8C4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps13aQ5H8C4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps13aQ5H8C4 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.92□□□□□ -0.5
Vps13aQ5H8C4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.92□□□□□ -0.5
Vps13aQ5H8C4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps13aQ5H8C4 Gm23400-201ENSMUST00000174994 102 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms