Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Gm12742-201ENSMUST00000117326 410 ntBASIC12.27□□□□□ -0.45
Scn2bQ56A07 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.27□□□□□ -0.45
Scn2bQ56A07 AY702102-202ENSMUST00000194651 1173 ntBASIC12.27□□□□□ -0.45
Scn2bQ56A07 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.27□□□□□ -0.45
Scn2bQ56A07 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.27□□□□□ -0.45
Scn2bQ56A07 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn2bQ56A07 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm8227-201ENSMUST00000223306 571 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gm19163-201ENSMUST00000223313 780 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.26□□□□□ -0.45
Scn2bQ56A07 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn2bQ56A07 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Mir7085-201ENSMUST00000184353 66 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 Gm4768-201ENSMUST00000206199 686 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.25□□□□□ -0.45
Scn2bQ56A07 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms