Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rc3h1Q4VGL6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rc3h1Q4VGL6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm11989-201ENSMUST00000117240 672 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm11362-201ENSMUST00000118838 850 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm27552-201ENSMUST00000183351 62 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm27844-201ENSMUST00000183613 62 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rc3h1Q4VGL6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rc3h1Q4VGL6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms