Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Syne3Q4FZC9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm22018-201ENSMUST00000104357 131 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm38002-201ENSMUST00000193255 180 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm6013-201ENSMUST00000212264 699 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm19309-201ENSMUST00000218295 205 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm9899-201ENSMUST00000065519 555 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Syne3Q4FZC9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm43133-201ENSMUST00000197472 463 ntBASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syne3Q4FZC9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms