Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm15198-201ENSMUST00000117283 177 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm12384-201ENSMUST00000119228 919 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm24196-201ENSMUST00000179161 110 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.86□□□□□ -0.35
Trim80Q3V061 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim80Q3V061 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim80Q3V061 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm13612-201ENSMUST00000119276 390 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm44397-201ENSMUST00000195950 113 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm38671-201ENSMUST00000200573 130 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim80Q3V061 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.85□□□□□ -0.35
Trim80Q3V061 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim80Q3V061 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms