Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.6□□□□□ -0.07
Limch1Q3UH68 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Limch1Q3UH68 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Limch1Q3UH68 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.59□□□□□ -0.07
Limch1Q3UH68 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm12997-201ENSMUST00000120207 640 ntBASIC14.59□□□□□ -0.07
Limch1Q3UH68 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.59□□□□□ -0.07
Limch1Q3UH68 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Limch1Q3UH68 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Limch1Q3UH68 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm10434-201ENSMUST00000101158 471 ntBASIC14.58□□□□□ -0.08
Limch1Q3UH68 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm8738-201ENSMUST00000172606 329 ntBASIC14.58□□□□□ -0.08
Limch1Q3UH68 Mir7070-201ENSMUST00000183657 86 ntBASIC14.58□□□□□ -0.08
Limch1Q3UH68 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.58□□□□□ -0.08
Limch1Q3UH68 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.57□□□□□ -0.08
Limch1Q3UH68 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Limch1Q3UH68 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms