Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.54□□□□□ -0.08
Col5a2Q3U962 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col5a2Q3U962 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.53□□□□□ -0.08
Col5a2Q3U962 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gm38117-201ENSMUST00000194653 939 ntBASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gm5451-201ENSMUST00000080545 579 ntBASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col5a2Q3U962 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.53□□□□□ -0.08
Col5a2Q3U962 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm25766-201ENSMUST00000104101 131 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm12030-201ENSMUST00000121917 223 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm18204-201ENSMUST00000209835 793 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col5a2Q3U962 Acot6-202ENSMUST00000222921 3622 ntBASIC14.52□□□□□ -0.08
Col5a2Q3U962 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.52□□□□□ -0.09
Col5a2Q3U962 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.52□□□□□ -0.09
Col5a2Q3U962 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.52□□□□□ -0.09
Col5a2Q3U962 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col5a2Q3U962 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.51□□□□□ -0.09
Col5a2Q3U962 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.51□□□□□ -0.09
Col5a2Q3U962 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col5a2Q3U962 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms