Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Rnf180Q3U827 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm5419-201ENSMUST00000119301 527 ntBASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm25554-201ENSMUST00000158075 113 ntBASIC14.37□□□□□ -0.11
Rnf180Q3U827 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm24328-201ENSMUST00000175104 67 ntBASIC14.37□□□□□ -0.11
Rnf180Q3U827 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.37□□□□□ -0.11
Rnf180Q3U827 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf180Q3U827 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Gm7765-201ENSMUST00000182585 974 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Gm37365-201ENSMUST00000193109 409 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Gm38117-201ENSMUST00000194653 939 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Gm30055-201ENSMUST00000203175 803 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 AC103672.1-201ENSMUST00000227502 365 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.36□□□□□ -0.11
Rnf180Q3U827 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf180Q3U827 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.35□□□□□ -0.11
Rnf180Q3U827 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf180Q3U827 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf180Q3U827 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms