Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.15□□□□□ -0.3
Trim43aQ3TL54 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm11637-201ENSMUST00000120601 592 ntBASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm25927-201ENSMUST00000175058 117 ntBASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm6266-201ENSMUST00000203844 806 ntBASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm25857-201ENSMUST00000082788 129 ntBASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43aQ3TL54 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43aQ3TL54 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43aQ3TL54 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Gm37922-201ENSMUST00000195596 455 ntBASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43aQ3TL54 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm13612-201ENSMUST00000119276 390 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Proscos-202ENSMUST00000178990 666 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.13□□□□□ -0.31
Trim43aQ3TL54 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43aQ3TL54 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms