Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccbe1Q3MI99 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccbe1Q3MI99 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm13223-201ENSMUST00000118609 747 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm2810-201ENSMUST00000118681 990 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm27618-201ENSMUST00000183671 60 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Gm2423-201ENSMUST00000074863 733 ntBASIC11.23□□□□□ -0.61
Ccbe1Q3MI99 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms