Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm12614-201ENSMUST00000179586 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm12613-201ENSMUST00000180323 382 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ebf1Q07802 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.6□□□□□ -0.39
Ebf1Q07802 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf1Q07802 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf1Q07802 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.59□□□□□ -0.39
Ebf1Q07802 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm12015-201ENSMUST00000117065 843 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm17040-202ENSMUST00000170597 889 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm20426-201ENSMUST00000173657 440 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm27552-201ENSMUST00000183351 62 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm27844-201ENSMUST00000183613 62 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm42790-201ENSMUST00000201268 969 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm44100-201ENSMUST00000204329 436 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf1Q07802 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.59□□□□□ -0.39
Ebf1Q07802 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf1Q07802 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf1Q07802 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ebf1Q07802 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf1Q07802 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf1Q07802 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ebf1Q07802 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm6963-201ENSMUST00000147879 379 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm32999-201ENSMUST00000192693 562 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gzmn-202ENSMUST00000225535 989 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.58□□□□□ -0.4
Ebf1Q07802 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms