Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf4Q06507 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf4Q06507 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Atf4Q06507 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm16149-201ENSMUST00000117631 309 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Gm11591-201ENSMUST00000120063 702 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Atf4Q06507 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm4207-201ENSMUST00000173144 960 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Mospd4-201ENSMUST00000180618 576 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm37213-201ENSMUST00000193077 586 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm18041-201ENSMUST00000218210 618 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm16372-201ENSMUST00000073088 450 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.16□□□□□ -0.46
Atf4Q06507 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atf4Q06507 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf4Q06507 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf4Q06507 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm9877-201ENSMUST00000064271 2627 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atf4Q06507 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm8261-201ENSMUST00000119275 1208 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm12403-201ENSMUST00000121384 959 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm13123-201ENSMUST00000122173 492 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.15□□□□□ -0.46
Atf4Q06507 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm22730-201ENSMUST00000158085 171 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm27341-201ENSMUST00000183570 106 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Gm21301-201ENSMUST00000189476 699 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm5650-201ENSMUST00000209641 598 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 AC117949.2-201ENSMUST00000225900 584 ntBASIC12.15□□□□□ -0.46
Atf4Q06507 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Atf4Q06507 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atf4Q06507 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atf4Q06507 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.15□□□□□ -0.46
Atf4Q06507 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atf4Q06507 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf4Q06507 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Atf4Q06507 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atf4Q06507 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Atf4Q06507 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm28359-201ENSMUST00000187470 1322 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms