Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm25927-201ENSMUST00000175058 117 ntBASIC12.48□□□□□ -0.41
Pfdn6Q03958 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gm45925-201ENSMUST00000218882 744 ntBASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gm5781-201ENSMUST00000219792 443 ntBASIC12.48□□□□□ -0.41
Pfdn6Q03958 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.48□□□□□ -0.41
Pfdn6Q03958 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.48□□□□□ -0.41
Pfdn6Q03958 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pfdn6Q03958 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm24231-201ENSMUST00000104315 133 ntBASIC12.47□□□□□ -0.41
Pfdn6Q03958 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm44124-201ENSMUST00000204159 472 ntBASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm6007-201ENSMUST00000208170 823 ntBASIC12.47□□□□□ -0.41
Pfdn6Q03958 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.47□□□□□ -0.41
Pfdn6Q03958 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pfdn6Q03958 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.46□□□□□ -0.41
Pfdn6Q03958 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.46□□□□□ -0.41
Pfdn6Q03958 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.46□□□□□ -0.42
Pfdn6Q03958 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.46□□□□□ -0.42
Pfdn6Q03958 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pfdn6Q03958 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.45□□□□□ -0.42
Pfdn6Q03958 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms