Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
VcpQ01853 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.27□□□□□ -0.29
VcpQ01853 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VcpQ01853 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
VcpQ01853 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Gm23200-201ENSMUST00000104379 132 ntBASIC13.26□□□□□ -0.29
VcpQ01853 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.26□□□□□ -0.29
VcpQ01853 Gm12291-201ENSMUST00000121627 311 ntBASIC13.26□□□□□ -0.29
VcpQ01853 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VcpQ01853 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VcpQ01853 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.26□□□□□ -0.29
VcpQ01853 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Gm5051-201ENSMUST00000204085 485 ntBASIC13.26□□□□□ -0.29
VcpQ01853 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.26□□□□□ -0.29
VcpQ01853 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.26□□□□□ -0.29
VcpQ01853 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VcpQ01853 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
VcpQ01853 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.26□□□□□ -0.29
VcpQ01853 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VcpQ01853 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VcpQ01853 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.25□□□□□ -0.29
VcpQ01853 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.25□□□□□ -0.29
VcpQ01853 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Snord83b-201ENSMUST00000104546 94 ntBASIC13.25□□□□□ -0.29
VcpQ01853 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.25□□□□□ -0.29
VcpQ01853 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VcpQ01853 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VcpQ01853 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.25□□□□□ -0.29
VcpQ01853 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.25□□□□□ -0.29
VcpQ01853 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VcpQ01853 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VcpQ01853 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VcpQ01853 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VcpQ01853 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.24□□□□□ -0.29
VcpQ01853 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms