Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm4271-201ENSMUST00000174444 973 ntBASIC12.63□□□□□ -0.39
Thumpd3P97770 Gm27514-201ENSMUST00000183692 110 ntBASIC12.63□□□□□ -0.39
Thumpd3P97770 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.63□□□□□ -0.39
Thumpd3P97770 Gm45880-201ENSMUST00000213041 853 ntBASIC12.63□□□□□ -0.39
Thumpd3P97770 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Thumpd3P97770 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.63□□□□□ -0.39
Thumpd3P97770 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.62□□□□□ -0.39
Thumpd3P97770 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.62□□□□□ -0.39
Thumpd3P97770 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm12291-201ENSMUST00000121627 311 ntBASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm26035-201ENSMUST00000083065 308 ntBASIC12.62□□□□□ -0.39
Thumpd3P97770 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Thumpd3P97770 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Thumpd3P97770 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Thumpd3P97770 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.61□□□□□ -0.39
Thumpd3P97770 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm23931-201ENSMUST00000103842 109 ntBASIC12.61□□□□□ -0.39
Thumpd3P97770 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.61□□□□□ -0.39
Thumpd3P97770 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms