Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm22042-201ENSMUST00000082989 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm26232-201ENSMUST00000083360 166 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm24136-201ENSMUST00000083374 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm26110-201ENSMUST00000083971 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm13875-201ENSMUST00000120162 282 ntBASIC11.75□□□□□ -0.53
Nkx3-2P97503 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm38317-201ENSMUST00000195564 343 ntBASIC11.75□□□□□ -0.53
Nkx3-2P97503 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.75□□□□□ -0.53
Nkx3-2P97503 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.75□□□□□ -0.53
Nkx3-2P97503 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx3-2P97503 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm15547-201ENSMUST00000122152 333 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms