Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.46□□□□□ -0.57
Cacna1aP97445 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cacna1aP97445 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.46□□□□□ -0.57
Cacna1aP97445 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cacna1aP97445 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cacna1aP97445 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Ginm1-202ENSMUST00000065124 300 ntBASIC11.46□□□□□ -0.58
Cacna1aP97445 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cacna1aP97445 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cacna1aP97445 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Cacna1aP97445 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cacna1aP97445 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.45□□□□□ -0.58
Cacna1aP97445 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.45□□□□□ -0.58
Cacna1aP97445 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.45□□□□□ -0.58
Cacna1aP97445 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.45□□□□□ -0.58
Cacna1aP97445 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cacna1aP97445 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms