Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43cP86449 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trim43cP86449 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.48□□□□□ -0.25
Trim43cP86449 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm18935-201ENSMUST00000212692 664 ntBASIC13.48□□□□□ -0.25
Trim43cP86449 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43cP86449 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trim43cP86449 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim43cP86449 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.48□□□□□ -0.25
Trim43cP86449 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim43cP86449 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trim43cP86449 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.47□□□□□ -0.25
Trim43cP86449 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim43cP86449 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim43cP86449 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim43cP86449 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.47□□□□□ -0.25
Trim43cP86449 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.47□□□□□ -0.25
Trim43cP86449 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43cP86449 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43cP86449 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm19994-201ENSMUST00000217086 586 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 Gm8712-201ENSMUST00000221090 701 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43cP86449 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.46□□□□□ -0.25
Trim43cP86449 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43cP86449 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43cP86449 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim43cP86449 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Paupar-201ENSMUST00000194826 3482 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms