Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.41□□□□□ -0.74
SgcaP82350 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Gm27390-201ENSMUST00000184516 176 ntBASIC10.41□□□□□ -0.74
SgcaP82350 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.41□□□□□ -0.74
SgcaP82350 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.41□□□□□ -0.74
SgcaP82350 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.41□□□□□ -0.74
SgcaP82350 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SgcaP82350 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SgcaP82350 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SgcaP82350 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SgcaP82350 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SgcaP82350 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Gm13453-201ENSMUST00000118708 357 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Gm9522-201ENSMUST00000182394 926 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Gm5279-201ENSMUST00000199575 745 ntBASIC10.4□□□□□ -0.74
SgcaP82350 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.4□□□□□ -0.74
SgcaP82350 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.4□□□□□ -0.74
SgcaP82350 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
SgcaP82350 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
SgcaP82350 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.4□□□□□ -0.74
SgcaP82350 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SgcaP82350 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SgcaP82350 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SgcaP82350 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcaP82350 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SgcaP82350 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
SgcaP82350 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
SgcaP82350 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcaP82350 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SgcaP82350 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.4□□□□□ -0.75
SgcaP82350 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcaP82350 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
SgcaP82350 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.39□□□□□ -0.75
SgcaP82350 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms