Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Mir1247-201ENSMUST00000116706 82 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.73□□□□□ -0.37
Msx3P70354 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.73□□□□□ -0.37
Msx3P70354 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.73□□□□□ -0.37
Msx3P70354 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm12058-201ENSMUST00000118614 437 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Gm13829-201ENSMUST00000119600 138 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.72□□□□□ -0.37
Msx3P70354 Snora78-201ENSMUST00000158630 128 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Gm27514-201ENSMUST00000183692 110 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Gm5370-201ENSMUST00000187187 574 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm37201-201ENSMUST00000191845 523 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 Gm39404-201ENSMUST00000216350 313 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.72□□□□□ -0.37
Msx3P70354 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.72□□□□□ -0.37
Msx3P70354 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Msx3P70354 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Msx3P70354 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Msx3P70354 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Msx3P70354 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msx3P70354 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.71□□□□□ -0.37
Msx3P70354 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx3P70354 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.71□□□□□ -0.37
Msx3P70354 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx3P70354 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms