Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrch1P62046 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrch1P62046 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrch1P62046 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrch1P62046 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.58□□□□□ -0.07
Lrch1P62046 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Lrch1P62046 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Lrch1P62046 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrch1P62046 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Lrch1P62046 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.58□□□□□ -0.08
Lrch1P62046 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.58□□□□□ -0.08
Lrch1P62046 Gm28686-201ENSMUST00000187404 609 ntBASIC14.58□□□□□ -0.08
Lrch1P62046 Gm42657-201ENSMUST00000201746 211 ntBASIC14.58□□□□□ -0.08
Lrch1P62046 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.58□□□□□ -0.08
Lrch1P62046 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.58□□□□□ -0.08
Lrch1P62046 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Lrch1P62046 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lrch1P62046 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrch1P62046 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm13916-201ENSMUST00000117368 628 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm21092-201ENSMUST00000178995 955 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Gm45120-201ENSMUST00000208880 408 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.57□□□□□ -0.08
Lrch1P62046 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lrch1P62046 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Lrch1P62046 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.57□□□□□ -0.08
Lrch1P62046 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lrch1P62046 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Gm7722-201ENSMUST00000120646 741 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Gm11980-201ENSMUST00000121445 986 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Gm25545-201ENSMUST00000122673 323 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.56□□□□□ -0.08
Lrch1P62046 Rprl1-201ENSMUST00000158050 327 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Gm2875-201ENSMUST00000211333 360 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Gm9797-202ENSMUST00000218003 294 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.56□□□□□ -0.08
Lrch1P62046 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lrch1P62046 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lrch1P62046 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms